This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000TD3U.1

Kazakhstan/LOC_000TD3U.1/2025
K. T. Maikhin, M. A. Berdikulov, G. K. Mussayeva, T. Karibayev, S. Zhussambayeva, S. K. Samarkhanov, B. Koigeldinova, K. Kalkabayev, B. Momynov, A. Kuanyshbek, A. Shevtsov, D. Kamalova & K. Botagoz

National Center for Biotechnology, Laboratory of Applied Genetics

Sample details

Collection date
2025
Earliest release date
2026-06-14
Sampling location
Kazakhstan (Turkestan Region, Otyr District, Karakonyr Village)
Isolate name
CCHV-2025/5

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-06-16 00:59insdc_ingest_userOPEN
Data use terms URL

INSDC

NCBI release date
2026-06-14
INSDC accession S

Submission details

Submission ID
PZ269562.1.S
Submitting group
Date submitted
2026-06-16 00:59:02 UTC
Date released
2026-06-16 01:05:44 UTC

Lineage

Segment S Lineage
IV.2

Files

Annotations

Alignment and QC

Total SNPs S
68
Total deleted nucs S
3
Total frame shifts S
1
Frame shifts S
NP:167-171(nt:552-568)
Length S
420 (25.3%)

Nucleotide mutations

Mutations called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

S

  • T220C
  • G229A
  • C235T
  • C241T
  • A247G
  • T250A
  • G262A
  • A268C
  • G271A
  • T277C
  • T283C
  • T289C
  • C295T
  • A298C
  • A322G
  • A325G
  • T334G
  • A337G
Deletions

S

551, 569, 570
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

NP

  • NP:D116E
  • NP:T124A
  • NP:G125N
  • NP:N150H
  • NP:P159H
Deletions

NP

NP:166, NP:172, NP:173
Insertions
N/A

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